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Colibacillosis

Other Names: Escherichia Coli Infection, Avian Colibacillosis, Coliform Infection

Colibacillosis is a broad term used to describe localized or systemic infections caused wholly or in part by avian pathogenic Escherichia coli (APEC). This condition encompasses a range of clinical disease manifestations in poultry. Chickens of all ages are susceptible; however, young birds—including developing embryos—are more frequently and severely affected. Colibacillosis commonly occurs alongside other diseases, which can complicate diagnosis and management.

The most common manifestations of E. coli infection in chickens include:
  • Cellulitis: A bacterial skin infection characterized by inflammation of the subcutaneous tissues, most often affecting the lower abdomen and upper legs.
  • Colisepticemia: A systemic infection (septicemia) that occurs when E. coli enters the bloodstream, leading to rapid dissemination throughout the body. This is a life-threatening condition associated with acute, nonspecific signs such as lethargy, depression, weakness, and decreased appetite.
  • Omphalitis (yolk sac infection): A common, typically non-contagious infection of the navel in newly hatched chicks, often caused by bacterial invasion, including E. coli.
  • Egg peritonitis, salpingitis, and oophoritis: Frequently associated with E. coli ascending from the cloaca or spreading from infected air sacs. Affected hens may have a recent history of egg binding, usually within the past six months.
  • Coligranulomatosis (Hjarre’s disease): A rare, sporadic form of colibacillosis characterized by granuloma formation, often secondary to prior intestinal mucosal damage. Capsular components of E. coli, such as galactans, are thought to contribute to the granulomatous response.
E. coli infections often occur concurrently with other pathogens, including bacteria, fungi, protozoa, and viruses. Common co-infections include:
  • Chronic respiratory disease (CRD): Typically associated with Mycoplasma gallisepticum, this condition develops gradually and is characterized by chronic respiratory signs such as tracheitis, sinusitis, airsacculitis, and conjunctivitis.
  • Swollen head syndrome (SHS): An acute, highly contagious upper respiratory disease caused by avian metapneumovirus (AMPV).

Clinical Signs


Clinical signs of colibacillosis are highly dependent on the form of the disease and severity of infection. Disease expression is influenced by factors such as age, duration of infection, environmental conditions, and the presence of concurrent disease.

Treatment


Mild intestinal infections may respond to antibiotics administered orally or via drinking water; however, most cases require parenteral antimicrobial therapy. Selection of appropriate antibiotics should be guided by culture and sensitivity testing, as many E. coli strains exhibit resistance to commonly used drugs, including tetracyclines, sulfonamides, aminoglycosides, beta-lactams, and others. Effective treatment also depends on the drug’s ability to penetrate affected tissues or granulomas.

Adjunct therapies—such as probiotics to support gut health and certain plant-derived compounds (e.g., baicalin, yucca, Schisandra chinensis, Echinacea purpurea, and oregano)—have shown potential benefits in reducing bacterial load or modulating inflammation in some studies, though their use should complement, not replace, appropriate medical treatment.

Clinical Signs

Weakness
Lethargy
Reduced appetite
Poor growth
Pasted vent/diarrhea
Depression
Droopy head
Skin inflammation
Not laying eggs
Lameness
Paralysis
Delayed crop emptying
Laying abnormal eggs, including lash eggs
Frequent nestbox sitting
Enlarged abdomen

Diagnosis

  • History
  • Clinical signs
  • Physical exam
  • Radiographs
  • Ultrasonography
  • Bacterial culture
  • Necropsy

Reported Cases

  • Case 1: Impacted oviduct, colibacillosis and egg yolk peritonitis in a Chicken A 1-year-old golden comet hen was presented because of an enlarged abdomen, cessation in egg production, difficulty in ambulating, and difficulty roosting. Results of radiographs and ultrasound examination revealed a radiolucent oval area in the right coelom and fluid with flocculent debris throughout the coelomic cavity. Escherichia coli and Proteus species were cultured from a sample of the fluid. Antibiotic therapy was temporarily beneficial, but the problem persisted and the hen was euthanatized. At necropsy, the oviduct was impacted with yellow caseous material. The diagnosis was colibacillosis and egg yolk peritonitis, which may have originated from an impacted oviduct. Ref

Treatment

NameSummary
Supportive careIsolate the bird from the flock and place in a safe, comfortable, warm location (your own chicken "intensive care unit") with easy access to water and food. Limit stress. Call your veterinarian.
AntibioticsSelected based on the manifestation, and antimicrobial sensitivity testing
ProbioticsAdministered alongside antibiotics to help promote good intestinal tract flora.S Bai et al., 2013; Y Wu et al., 2018
Baicalin (Scutellariae radix) extractResults strongly suggest it as a viable therapeutic agent in the treatment of inflammatory diseases induced by bacteria, especially E. coli.X Cheng 2022; M Bao et al., 2022; Z Hu et al., 2022
Yucca (Yucca schidigera)Reduced the proliferation of Escherichia coli in hens.J Wang et al., 2010
Schisandra chinensisCan be a potential agent to treat inflammation caused by avian colibacillosisM Yuan et al., 2020; Y Kim et al.,2013; D Ma et al., 2007
Neem (Azadirachta indica)Enhanced the humoral and cellular immune responses attributed to its immunomodulatory property in experimentally E. coli infected chickens.V Sharma et al., 2019
Coneflower (Echinacea purpurea)Improved hematological and serum biochemical adverse effects caused by E. coli infectionM Hashem et al., 2019
Oregano (Origanum vulgare)Significantly reduced coliform and E. coli counts in broiler chickens.P Scocco et al., 2016; A Roofchaee et al., 2011

Support

Prevention

  • Protecting young chicks from cold exposure
  • Good husbandry and biosecurity practices
  • Maintaining clean living conditions with proper ventilation
  • Minimize stress
  • Avoid incubating dirty eggs

Scientific References

Good Overviews

Age Range

All ages are susceptible, but young birds are more commonly and severely affected.

Risk Factors

  • Shipping chicks in the mail
  • Exposure to temperature extremes
  • Placing dirty eggs in incubator
  • Inadequate ventilation
  • Poor sanitation
  • Overcrowding
  • Concurrent infections
  • Nutritional imbalances

Seasonality

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